SGBC - IITM | Stroke 2D Brain Atlas

Loading Stroke 2D Brain Atlas

Preparing MRI and Histology data...

Histology 3D Reference

Axial

A R

MRI server not available

Timepoint

Sequence

MRI Coordinates

Registered — Voxel (i, j, k)

i (Axial): 0

j (Coronal): 0

k (Sagittal): 0

Registered — Distance (mm)

Axial: 0 mm

Coronal: 0 mm

Sagittal: 0 mm

Histology 3D Reference — Voxel (i, j, k)

i: 0

j: 0

k: 0

Histology 3D Reference — Distance (mm)

Axial: 0 mm

Coronal: 0 mm

Sagittal: 0 mm

Raw In-Vivo — Voxel (i, j, k)

i (Sagittal): —

j (Coronal): —

k (Axial): —

Raw In-Vivo — Distance (mm)

Sagittal: — mm

Coronal: — mm

Axial: — mm

VoxelMap: Loading…

Atlas Slice # (480μm)

0

Atlas Distance: 0 mm

Validation

Error: —

MRI Signatures of Stroke

Stroke ROI Overlay

Ischemic Core DWI Hyperintensity

ROI Opacity

Ischemic Core

70%

DWI Hyperintensity

70%

View Options

Show Crosshair

Slicing Planes

Z — Sagittal (L-R) ← sections

Y — Coronal (A-P)

X — Axial (S-I)

Z axis (RED) controls sections & z_mm

In-Vivo MRI — Registered to Ex-Vivo (DWI)

Axial

A R

MRI server not available

Coronal

S R

MRI server not available

Sagittal

S A

MRI server not available

In-Vivo MRI — Native Scanner Space (DWI) [map loading…]

Axial

A R

MRI server not available

Coronal

S R

MRI server not available

Sagittal

S A

MRI server not available

View

Measurement

Histology Map1

Overlay Opacity

Select overlays from the map Overlays button

Histology Map2

Overlay Opacity

Select overlays from the map Overlays button